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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113909712, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSVYLALVA LAVILLGLRL WPAQPLSQLM PSSREVLAAD GSLMRLTLAT DGQYRLWQDL  60
   61 EDISPIMIKV MLLKEDRYFY YHPGVNPVAL VRAILATYVG GDRQGASTLT MQLVRRVYAI 120
  121 NSRTVSGKLE QILAAFWLEA RYSKHELLEA YLNLAPMGGN IEGVGAASQI YFHKIAGELS 180
  181 LSEALSLAVM PQSPARRARF QADFQAARDR LALFWQQTYP DDPRNQGLLV LTALGAERNE 240
  241 LPFKAPHFTR RQLRQDATII HTTIEPKLQT LLELRIRQYV AGKRHLGVNN ATALLIDTRD 300
  301 QAIKAWVGSA DFFNPMIYGQ VDGVVARRSP GSTLKPFLYA LGLDQGIIHP QSIIKDAPTA 360
  361 FGSFEPENFD HRFTGPISAH DALIKSRNLP AVWLAGQLTR PNLYGFLRQA QILGLRGESH 420
  421 YGLALALGGG ELTMMELGRL YLMLASEGRY YPLRERTDQP INPPSTQLLS QAASFLVLDM 480
  481 LKDNPRADGL PKQGWRVAWK TGTSWGFHDA WSAGVAGPYV LVVWVGNFDA TPNAAFIGAE 540
  541 IAGPLFFNIS DALQASLPST ADKALAQPST VKKVNICAES GELPNLWCPK VVEGWFIPGV 600
  601 SPVKVSTLHR PVWVDNQTGM AVCPPYDAHT QHQEVFAFWP SDMASLFEQA GLPRKLAPQL 660
  661 PESCRNTIQL TNIDPVIRSP LRNVTYSLRQ SHLNEHIALK ADAASDASML YWFVGRDLIG 720
  721 QSLPKQTLEW RPSTAGDYKL SVTDDKGRSA SLNLNVSILQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle