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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113948910, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKSKLRTFR SRILSHIALP LVLIMASVYA VNAWFSYLST ENRLYHSLTQ EASHSASRLQ  60
   61 LLLEHAQANT QGLADFIGFL SSKEDMNDTE SVKSVLMNRL KRNPDFFGSA VAFKPNTFPN 120
  121 RKLFSPYVYR DTSGSDDLHY LDIGAEGYDY TDGTWDWWNN AINQAAGYWS KAYFDEGAGN 180
  181 ILMVTYSAPF GEAEHYFGVA TVDLALDGLP KQLGIAPNRL VVLDDQGRLI YHVDREKVLA 240
  241 TTSTQWLDKN KYRNADFWAL QAKGLDGQAR FVDDKDVVYL ASIATVPQLK WRVIVLAPEQ 300
  301 ELFSSLLDDM ASIILNLSLL TLLLLLTCYL AAKRLTRPLE LLESGILSFG QGKTQQLIVP 360
  361 KGAVSEIVTL SNTFNQMAEL LAEREQAILD SRGNRFARLI DGMSDKSFYC SLDPDGQLAQ 420
  421 VSEGVTKVLG ISPDLLKRKY QRLFSANPLN EKNWQYTDLA LKGQNVPSHQ VEMLDDQGHL 480
  481 RRLDVFMQPL MSDTNELMSV EMLFTDVTEQ FSAAVWSNAV LEAAPEAMLI VDELGQIVFT 540
  541 NSRCLQLFGY ETGAMLGLQV EALLPQELGE RHVLERQTFL REGRDRSMVN ARHVRALKAD 600
  601 GNEFIAEIAL SILPTAFDGQ RQVAASIRDM TQKLAVEQKI RDSEQRFRGL VTNIPGAVYR 660
  661 TRIGDVWFME YISDNIAEIT GYAASQFIEN RQRTFASLIL EEDRPTCHLH IDRALAQQET 720
  721 FEVEYRIRHR DGSIRWVHEK GKASYTEEGI PLWFDGSIDD ITESKLALVQ LEQSRQQMTN 780
  781 ITESIPCTVY QLQWHSPTDR RFTFLSGAAM KMLGLHRDDL MSNFDIIAER IFDEERPDVV 840
  841 RALSGQSEDR LQWIREFRYR HPNGSIRWME AGASGHLGEE GGITWNGYVM DITQRKTIEQ 900
  901 ELALSEAHFK ALFDGATIGI VNVDIKGVIL DCNDQFCADM ALSRNHLRNT AIFEVLSEQD 960
  961 QPIAKAQFQE LVEGKIDHYR GERSFIRPSG APLWMTVNVS ALLDAQGQFE SAVISMVDMT1020
 1021 ELKLLSDELL LAKEQADAAS KAKGDFLANM SHEIRTPMNA IIGMSQLCLQ TELDKKQKNY1080
 1081 VEKIERASQS LLSIINDILD FSKIEAGKLD IDSVPFQLDT MLEDLSDMFS EKAAHKQIEL1140
 1141 LFAVAPNVPR YLLGDSLRLG QVLINLMNNA IKFTERGEVL LSLSLVEQQD DDVVLRFSVR1200
 1201 DSGIGLTEQQ QAKLFKSFTQ ADTSTTRKYG GTGLGLAICK QLVELMGGKI GVESQFGHGS1260
 1261 TFYFTVKLHI SDGQKLVLEQ ELEGMSVLVV DDNATARDIM CTTLESMGFR VDTVRSGEEA1320
 1321 ISRCLLQAYE VALIDWKMPN MDGLETARQI QLQAQSQSQS QSQPQSHPQP KILMVSAHAD1380
 1381 HEFLTQIEQL ALAGYISKPI SASRLLDGIM NAIGREGILP VRRRTEELAP QLLLPLQGKR1440
 1441 ILLVEDNEMN LEVASEFLEQ VGIILSIATN GQIALDKLSQ QHFDLVLMDC QMPVMDGYQA1500
 1501 TQAIRKRPEL ANLPVVAMTA NAMAGDRDMC IRAGMNDHIA KPIEVNVLYQ TLLKYLAPAS1560
 1561 ETVAVVTSAQ TMPSNTKFGA GNSAEQTVLL KWPEHPELDI DRGLQLVQHS TRLYQRIFDR1620
 1621 FVSSQRNVVE QIRKAIAANQ VEDAVRIAHT LKGLAGNLSS AKLVELARLL ELHLTENAPF1680
 1681 EDELVQIQPL VASICDAIEY AKPAAVNQAE PQAVDLLSAE DLRAALQALR QNLDDADASA1740
 1741 VAKIDALKPQ VSSAMWQALS PALSMINQYQ FDEAIDLIDD VIAQLG

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