YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113951013, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALFFKMTLD IGSFLYKSFW YQSRAKTLGA FILLSVFMAT PAHAAKVLIL GDSLGASYGM  60
   61 AEQSGWVALL QKNLPEHQFT NGSVSGETTA GGLRRLPALL DSVAPDLVVV ELGGNDGLRG 120
  121 FPPTQLENNL IQIITLAKDS GAKVLLTEIM VPPNYGPRYT QKFTQVYQDI SKAQDIVLIP 180
  181 FFMQDIAPHP ELMQRDGIHP NEKAQTQIAT WMQPWIEDAL TQ

Type	Start	End	Confidence
Signal Peptide	1	44	0.99
N-region	1	35
H-region	36	41
C-region	42	44
Cleavage Site	44	45
Non-Cytoplasmic	45	222	0.99