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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114187620, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFFAVAALF ATAAVAVPGR PISSSFEADT CSSHAMCCKQ QVASGSEHLT EHEKAGLLDV  60
   61 LGNVDLGGLL GHKGTGRYSD CESLVQLGGK CDTNAVCCPT GSQTGLVNIG CVGLPIKLLM 120
  121 HNLRLTQKTT IATAIKIMVT IKSVFESSFD RPRTLKQTDG CKLIVSVSAI IIDLSAGTAP 180
  181 ETPNAKPVRN RPVVSPECSP RGLHSPLLLF VSFSCLSVYP VSIMDSSASP QESRPSDAAD 240
  241 RPHKRRKVAV ACDECRTRKV RCDGIQPVCG PCTKRADQGV RCVYTGEPEK KRAVRNLCQG 300
  301 TPGSSSTCTH RATRPARGED GVNAMMGAVE EERLTQGFFG SSSAASFMRQ IKTAVDKRVP 360
  361 SPYRRTSDSV LGIEPPSSLM STRTPKPSGV PNYVLPPRKT ADSLMEVYWN FVFPLYPLVD 420
  421 STLLRAEYSR IWMGEPLQSD ENMLMCTFNV IFALACQLAD FIPPEEREAS ADAFFSRAKD 480
  481 LLHFNLWNTG SAGLIQCLLL MAQYLQSTDS AHQCWIVTGL AIRNAQSLGL HLPQTIARLQ 540
  541 SPQEQQLARK IWHGCVLMDR VISMTFGRPA MISKASCGSV PLPATIDEEY IPAASGVEAT 600
  601 QPADRPSLMA FYAKSLELYE ILNDILLSLY KPVPEESPED IYDFYFNKES SEGEHTIFQL 660
  661 DRALTKWTKS LPPHLRGSYY AGGSGNLVFY RQSVVLRARF LHVRMLLFRP ILSKYCTARD 720
  721 IGDTDPLISI HDSFPQRVAL QCSIICVKVA QEVVELIYTN IPADGTSGPL PAWWYNILYV 780
  781 YTAATVIIAG RLCPAILEEV TESALTRSWN SALEILRKYQ SYSTSARRCV AALEILYERV 840
  841 VSEGPQQNEQ PTSNQPAGVA PSNTNDMSLG EGMNAILLDG FDLPDFQDMS WLNSVPSNLY 900
  901 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle