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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115385839, gi...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSKHDPAS LPSSLHSVLL DLLKHPYPHV PNPPNCRKRA SVALVLRVRP TFGHWPDSDH  60
   61 ALSSLPDDTT TEERLNSFFS QPWVEHGDPE VLFIKRASRV GDRWTGHVAL PGGKRDPEDA 120
  121 DDRAAAIRET SEEVGLDLTT EDYLYVGNLP ERVVTTSWGS IPLMVLCPFL FLSVRSESPT 180
  181 LKLQPTEVAS THWVPLRALL SPSMRTVEYV DMSQRFRNMG GFIVRLALRS VMGFMQFSAI 240
  241 ELAPTESLQS NSTPGLIPEN APAPSLFARW KAWCLSNQAD SNNRNRPLLL WGLTLGILAD 300
  301 FLDMLPPHNA VELWKYPTFT TPDLRLIVNL LTHRLRQRNK LQVKSGARPS NTAVDGQTAA 360
  361 LPVTETTGIK DDCNEVGIGG LGVGRYYGPS DKSPEGTRYA VGIMLRGYYA KLRTAIYIFV 420
  421 AWRIALGSVG AIYVWRLLRQ KQVIERIFHF LLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle