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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114188365, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGEHLRSS MIKEYYWYYI AYGDLKKALK TDFATAPTQE NPKPDRKPWT EDDEKNFVSL  60
   61 LESELDKVFN FQKIKSEEIV RRIQASETDV NDIVSRLDNA SATSRRQSIR PSAPPPSDED 120
  121 FLVLEQVLSD IIADVHDLAK FTQLNYTGFQ KIIKKHDKQT GWHLKPVFAA RLNAKPFFKD 180
  181 NYDAFVVKLS KLYDLVRTKG NPVKGDASAG GSQQNFVRQT TKYWVHPDNI TELKLIILKH 240
  241 LPVLVFNPNK EFEEKDTAIS SIYFDNTDTW ELYQGRLKKT EGAEAIRLRW YGGMESDQIF 300
  301 VERKTHREDW TGEKSVKARF SLKEKNVNAY LSGRMTVESI FEKMRREGKK SEAEIDDLEQ 360
  361 LAREIQYRVI SRKLEPVTRT FYHRTAFQLP GDARVRISLD TELTMIREDN LDGRRRSGSN 420
  421 WRRMDIGVDW PFSKLPPEDV ERFPYAVLEV KLQTQAGQEP PKWIRELTAS HLVEAVPKYS 480
  481 KFIHGTATLF PDRIHLLPFW MPQMDVDIRK PATRRFGIQR PLASTSMSAN ETQEDDDSDD 540
  541 DDTNDAHASN GQPRTQAPDA LDQNGLFDET DGNALDIEER IGAQPLPGDE DYPLYDSDQE 600
  601 TVSSDELEEA RRVGGMHYYH QLAKYYAHRT GQGLIHVLQA LIPRPRPTSL PPPERRGITV 660
  661 IGDQRTVKRF AAPKGKRIHV PVRVEPKVYF AAERTFLSWL EFSILLGTIA ATLLNFGNDY 720
  721 ITFACSWAFT ILAALTLVYS LMLYVWRVDK IRKRRDVKRV YYEKWGPTVL GIGLVVIVLV 780
  781 NFGLRVRQAG FATRDGRMPG LNRGADGGEL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle