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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115437050, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEHGQTPHP RPYDTDSTAT VMADEAPSAS HTPNTSRADN WALMPQVKEQ NQRDVDSGFH  60
   61 RRELGVTWKN LSVEVVSAES AVNENFFSQF NIPQLIRESR NKPPLRTILD NSHGCVKPGE 120
  121 MLLVLGRPGS GCTTLLKMLA NRRLGYRAVE GDVRYGSLTA DEAAHYRGQI VMNTEEELFF 180
  181 PTLTVGQTMD FATRLKIPFH RPKGVESAKA YQQETKKFLL ESMGISHTHD TKVGNEYVRG 240
  241 VSGGERKRVS IIECMATRGS VFCWDNSTRG LDASTALEWT KAVRAMTDVL GLSSIVTLYQ 300
  301 AGNGIYDLFD KVLVLDEGKQ IYYGPMTQAR PFMENLGFVC REGSNVADFL TGVTVPTERK 360
  361 IRPGYESRFP RNAEAIKVEY EKSSIYSEMV AEYDYPDSDQ ARRCTDEFKL SVREEKNKKL 420
  421 PDSSPFTVDF VDQVKTCIIR QYQILWGDKA TFLIKQVSTL IQALIAGSLF YNAPNNSGGL 480
  481 FVKSGALFFS LLFNSLLSMS EVTDSFSGRP VLIKHKSFAF FHPAAFCIAQ ITADIPVLLF 540
  541 QISIFSLVVY FMVGLTTSAS AFFTYWILVF ATTMVMTALF RAIGALFTTF DGASKVSGFF 600
  601 ISALIMYTGY MIQKPQMHPW FGWIYWINPL AYGFDALLSN EFHNKIIPCV GTNLVPTGPG 660
  661 YENAVGHQSC AGVGGAIQGN NYVTGDQYLA SLSYSHKHVW RNFGILWAWW ALFVAITIIA 720
  721 TTRWKAASES GSSLLIPRER LEKHRQVVRP DEESQFDEKS KTPQDSRSQD DDIDKQLVRN 780
  781 TSVFTWKDLT YTVKTPSGDR MLLDHVYGWV KPGMLGALMG SSGAGKTTLL DVLAQRKTEG 840
  841 TIHGSIMVDG RPLPVSFQRS AGYCEQLDVH EPFATVREAL EFSALLRQPR DVPDAEKLKY 900
  901 VDTIIDLLEL HDIADTLIGR VGAGLSVEQR KRVTIGVELV SKPSILIFLD EPTSGLDGQS 960
  961 AYNTVRFLRK LADVGQAVLV TIHQPSAQLF AEFDTLLLLA KGGKMVYFGD IGDNGQTVKD1020
 1021 YFARYNAPCP PNVNPAEHMI DVVSGALSQG RDWNQVWSES PENQKAMAEL DRIIQDAASK1080
 1081 PPGTTDDGHE FATSLWYQTK VVSKRMCVAI FRNTDYINNK LALHVSSALF NGFSFWMISD1140
 1141 TVHSMQLRLF TIFNFIFVAP GVINQLQPLF LERRDIYDAR EKKSKMYSWV AFVTALIVSE1200
 1201 IPYLCLCAVL YFACWYYTVG FPTDSNKSGA VFFVMLMYEF VYTGIGQFIS AYAPNAIFAS1260
 1261 LTNPLILGTL VSFCGVLVPY QQIQAFWRYW IYWMNPFNYL MGSMLTFTVF DVEVRCKESE1320
 1321 FALFDPPNGT TCASYLSSYM HTTGARMNLT NPDATEGCRV CEYTRGSDYL VTINLMDYYY1380
 1381 GWRDAAIVVL FALSSYALVY VLMKLRTKAS KKAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle