YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115400882, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSLRTAQPA QSFLRRAAAT PLARASVPAR SFASVQSDIF KPTKYGGKYT VTLIPGDGIG  60
   61 AEVAESVKTI FKADNVPIEW EQVDVSGVDT GNKHSEELFK ESIASLRRNK LGLKGILFTP 120
  121 VERSGHQSFN VALRQELDIF ASIVLIKNIP GYETRHKDVD LCIIRENTEG EYSGLEHQSV 180
  181 QGVVESLKII TRAKSERIAK FAFGFALANN RKKVTCIHKA NIMKLADGLF RSTFHKVAEN 240
  241 YPTLEVNDMI VDNASMQAVS RPQQFDVMVM PNLYGGILSN IGSALVGGPG VVPGCNMGRD 300
  301 VAVFEPGCRH VGLDIKGKDQ ANPSAMILSG SMLLRHLGLD DHANRISKAV YDVIGEGKTR 360
  361 TRDMGGVATT HEFTRAVLDK MEAAL

Type	Start	End	Confidence
Signal Peptide	1	33	0.88
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	385	0.99