YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114190277, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFSNIFRII NIAVGVIMIL GGIAQFFPPS VGSIVVGAYV IIFGLLVGGL EFLPNVPDYV  60
   61 YRYASFLFSF LGRGVFYIFV GSIMLHGHVL RYIAGSIVGF IGLGYLALEF IPSIEPPSNM 120
  121 RETDQGWGAE QV

Type	Start	End	Confidence
Cytoplasmic	1	6	0.84
Transmembrane Helix	7	27	0.92
Non-Cytoplasmic	28	33	0.67
Transmembrane Helix	34	53	0.92
Cytoplasmic	54	62	0.63
Transmembrane Helix	63	85	0.85
Non-Cytoplasmic	86	89	0.63
Transmembrane Helix	90	111	0.89
Cytoplasmic	112	132	0.80