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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115400173, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRSLLVVA SAASLVLPGT AAGMSSELQS VLKNTHRGDE YKYPTDFTRG IMPIPVHSHN  60
   61 DYWRDIPFYT GMTCNLGFPN FADLAQGLSK GCISTEADVW LYDGTLYVGH DESSLTEERT 120
  121 LESLYINPML DVLKWQNPKT PFVTSPTKNG VFDTDPSQTL YFFIDAKTAG RETFEAVIAA 180
  181 LQPLRDHGYL TTLKDNKTIT YGAVTVIGTG NTPLEMVGPV ADRDYFFDAH LDTLDNPENS 240
  241 GITSLISPIA STSFTSAIGA VSWANAPLLD HINGIGHIVF KLLLLETCDV LVVSMYNHVI 300
  301 YEIGRDSKVL PTEAKVTIRH VSSAPTPCGA LFAAPPGEQS ESTFCENHFL SVSAASDEHD 360
  361 GAEVIVFGME VLVYSTTHLT TIFVSKADST GYLHVLKLPP RASVLRRISG TFLSYLVQTR 420
  421 QRPGVRLVLS LFARAQNQYL FPGSIENPEK HVLDDRGLIK WWCRAVDPIL REYEPESGSH 480
  481 DKGAADQAAE SAKSSATAFL IVPGCDKFET RGFFPPSAKT DDKDRPRWVN SYPVRQLCDN 540
  541 PSAPPRCLIP RFPDDPKTRF LIDLDDELPE QTESSGATEN AGQWRSVKSL DQFWEMMSFR 600
  601 QECSAGRLVG FLWLVINPPG LVNSVQMTSS RPAPASAVKE ALGTGSNAAE EQSVATEKTR 660
  661 STTEPNDAPL PDQRDEASSQ APSKSQQSTD SNAFFWPDTG RGHAVLSEED YKTAINFLLE 720
  721 QDFDHKEAAI SSTKGWGEKV ASLADQLWVG QQVVGSMASA ESAPSTGTTT NLIDSGLVRK 780
  781 RKKETEEGSR QEVGQTRSDA QTPEPKLSSA EPSGINVLQA NLIRKKKKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle