YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115398351, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLIWTVFF VHVAIYLINT IGASTIDGLL WLLYLKLPTS TSKCAQEQTR LKREVVQLKR  60
   61 EMNNTSSQDE FAKWAKIRRR HDKTMEEYEK ISTIALLLLR DTDKTLNAQK TSFDWSVKIA 120
  121 RWLSTNGLKI FLQFWYSKTP VFALPQAWFP YYVEWVLSFP RAPMGSVSIQ VWSNVCATAI 180
  181 SVLAEIVTAA FMQMASRTAV PVAAEDKKEL

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.76
Transmembrane Helix	12	34	0.88
Cytoplasmic	35	130	0.88
Transmembrane Helix	131	149	0.61
Non-Cytoplasmic	150	168	0.66
Transmembrane Helix	169	191	0.79
Cytoplasmic	192	210	0.72