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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115396926, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWRLPGARS TLPASVALLL LPVLVAPQQL QGRQNDRDLP STVSVPLGPT VHHGHHPRSD  60
   61 PLHVKSNDAS ALATLALAGS GRAVRAPPAQ ASGPSAGLAP QLHARSLQDW EVEDFVLLAT 120
  121 VDGSIHARDR KTGAARWALE VPSSPTVESI YHRANRSSFD RTQPEDDFIW IVEPNQGGSL 180
  181 YIYSPGPDAG LQKLGLTVKE LVDETPYSGT DPAVTYTARK ETTLYTIDAR TGTILRVFSS 240
  241 RGPMPSGQEC RKVDGLDVDA EDCDSPSGTL VLGRIEYAVA IQNTETGDPI CTLKYSEWTA 300
  301 NNRDMDLQSQ YFRTMDQSHI YSMHDGVVLG FDHSRMERPR YTQRFATPVV RVFDVARPVN 360
  361 VDSPDAPTPL VLLSQPSQPP DPDYGSLDDR DARVFIDATN AGGWFAMSEE TYPLVTGRAK 420
  421 MAQCYEKDYF RDGQPLMSLT PSQQRDALAG VHSLNGPRVI RRPIPSISGS SSVDLSNDTP 480
  481 RDLMRSPSEL ALPPALRHST IIRKGWDNAV DIFVTLLLLF FGTFIYFNSH NIQELAKQKL 540
  541 DIKNIISAYG QPPLSTPSTP VIDGPQLQRE KSPARPVTNV TVDMDLAEGP AGDVTPKPKK 600
  601 ARNAPAPDAT PRVRIREPSR GPDGDEDVDD LALDGADDTE KPKKKARRGR RGGKAHKRGK 660
  661 KPGTEGENKE QADRVVNELS NLRPPSRLET DVQLSRTVSN EIIEMDGLVQ IGRLKVNTDI 720
  721 VLGHGSHGTV VYRGAFDGRD VAVKRMLVEF YDIASHEVGL LQESDDHNNV IRYYCREQAA 780
  781 GFLYIALELC PASLQDVVER PFDFPQLVEG GLDMPDVLRQ IVCGVRYLHS LKIVHRDLKP 840
  841 QNILVAMPRG RSGSKALRLL ISDFGLCKKL EDNQSSFRAT TAHAAGTSGW RAPELLVDDD 900
  901 KSPAIQSVES QHTESSEPAV VDPQTNRRAT RAIDIFSLGC VFYYVLTRGS HPFDKDGKFM 960
  961 REANIVKGNY NLDELDRLGE YAFEAHDLIR SMLSLDPRQR PDASAVLTHP FFWSVSDRLA1020
 1021 FLCDVSDHFE FEPRDPPSDA LLLLESVARR VMGPEMDFLR QLPAAFKDNL GKQRKYTGSK1080
 1081 MLDLLRALRN KRNHYNDMPE HLKAHIGGYP EGYLNFWTVK FPSLLMSCHW VIVELGLTRI1140
 1141 DRFKRYFTVP E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle