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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114193936, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSASSTPVH HPSADHSQPA DSHASGNARP ATTTAAARNS ADDNDHDATS QKENISPLGG  60
   61 DAATKADADR DTGHKQGGAE DVDDFGLPIR ARPKPPRSTG EASEDQELFH DVEETVSSNA 120
  121 AASKGSERES DNALESAPKT SKEDQSTTED LSEQGAQSST PMTTESDTAQ DKKAMGSMDA 180
  181 EKPAPPSDVP PAGENGSPPP YTEKAQSETS GASVQHHPKH KKRASLKPSE WSHQRLNAPQ 240
  241 ESEDEAEEES EDEWREMPAL DEFDVYDDYG RLIARGAKTE DNEAVYNGLG GAGRGYTRVQ 300
  301 LDDDAESVNS LDEDTSYLFK ESAANAAGIE DEELRDATSQ LQATKDLLTE SQRIAYVGVA 360
  361 RLSIYQMTRD IERAPQTRGT RKARQKCIDS TRKWGQGMMA RIYSHMEIDA AEQVMIEQLA 420
  421 EHGVEPSDLV RPLMQNARVQ NPLANEEEDA PKESISTTAS PSSKDAGRGS LSTDLDRSSM 480
  481 SSAPPPYDMH EGEDLPEVKT PSQMPTSAKI DIDLRWTVLC DLFLVLIADS SYDSRSRTLL 540
  541 ERVGKSMEVP WLQIARFEKR VIDALEMQEA AEKETWDESD NMEKRRKLAL KRKYMIMGIA 600
  601 TVGGGLVIGL SAGLLAPVIG AGLAAGLTTV GISGTGAFLG GAGGTALIAS GATLTGSTIG 660
  661 LKASHRRMGA VQTFEYRPLH NNKRVNLIVT VSGWMTGKVD DVRLPFSTVD PIMGDLYSVL 720
  721 WEPEMLRSMG DTIKILGTEA LTQGLQQILG STVLVALMAS LQLPLVLSKL SYLIDNPWNV 780
  781 SLTRANAAGL ILADSLMAHN LGKRPVTLLG FSLGARVIFS CLKELADKGA HGLIQNVYLF 840
  841 GSPIVANKDE YLKARSVVSG RFVNGYSSND WILGYLFRAT SGGIMRVAGL AKVEGVPGIE 900
  901 NFDVTKLVNG HMDYRAAMPR LLKEVGWEVL SEEFAEIEDP DPDNHGERQR ELIREIEEAR 960
  961 REAEAKPDKK RFGLFKRGKL AQKKGWETYD VDRNSPIPRS PSENDGAGSV LFDIDAIKAE1020
 1021 LASESIEVKQ LESTLPPMKL DLNPSPSPTS SASSPAVDKH APKADASTSR PSAESTPGHK1080
 1081 SQDIPSSVPP EEQIELSFDT TYHEPPQRTQ SSFEPSTAAE LDPHGSRPPL RSSMTMPVGV1140
 1141 GASALGAMAL EPNAWADHDF GNGDEGEIQM SFE

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