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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115390174, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFALLPASR RSSPIIHRSL IATTITRAAA SLSPAAVAAS LAFGALPSHL SRQKQCYFFS  60
   61 TTPLQSPCLS RNHRRPLVPH TLRPWVQWLP GPQSLTRAPH TSQPRVFSSL NPSIHRPTSH 120
  121 NPHRSIMDLN GDSNAKRKRS SISAAAERPA KHLRPENSSL TPGDTTPANG TVYDVEDDAE 180
  181 SSHLIPIAAA PADSPEWQAT IEEVVKSVVS IHFCQTCSFD TELSMSSQAT GFVVDAERGY 240
  241 ILTNRHVVCP GPFWGYVIFD NHEECDVRPV YRDPVHDFGI LKFDPKAIRY LKLTELKLQP 300
  301 DAARVGSEIR VVGNDAGEKL SILSGVISRL DRNAPEYGEG YSDFNTNYIQ AAAAASGGSS 360
  361 GSPVVNIDGH AIALQAGGRA DGAATDYFLP LDRPLRALNC IRRGEPVTRG TIQTQWILKP 420
  421 FDECRRLGLT PEWEAKVRKA APTETSMLVA EIILPEGPAD GKLEEGDVLL QVNGELLTQF 480
  481 IRLDDILDSS VGKTVRLLVQ RGGQNVELEC EVGDLHAITP DRFVTVAGGT FHDLSYQQAR 540
  541 LYAIATRGVY VCEAAGSFKL ENTLSGWLID SVDKRPTRNL EEFVEVMKSI PDRSRVVISY 600
  601 RHIRDLHTRG TSIVYIDRHW HPKMRLAVRN DETGLWDFSD LADPIPALPP VPRKANFIQL 660
  661 DGVSQPAAAE IVRSFVRVSC TMPLKLDGYP QAKKTGFGLV IDAEKGLVVV SRAIVPYDLC 720
  721 DINVTVADSI IVSAKVVFLH PLQNYTIVQY DPSLVQAPVQ SARLSTEYIK QGQSTIFVGF 780
  781 NQNFRIVVAK TAVTDITTVS IPANASAPRY RAINLDAITV DTGLSGQCSN GVLVGEDGVV 840
  841 QALWLNYLGE RTPSSHKDVE YHLGFATPAL LPVASKVQAG EMPKLRILNM ESYVVQMSQA 900
  901 RIMGVSEEWI QRVTQANPSR HQLFMVRKVD CPPAGFSTTA HDSFQEGDII LTLDGQLITR 960
  961 VSELDIMYDK DVLEALIVRN GQEMKIQVPT VPTEDLETDR AVVFCGAVLQ KPHHAVRQQI1020
 1021 SKLHSEVYVS ARSRGSPAYQ YGLSPTNFIT AVNGVPTPNL DTFVQEVSKI PDNTYFRLRA1080
 1081 VTFDNVPWVV TMKKNDHYFP MSEYIKDPAH PAGWKTVSHD KAKHKDGIAP DAANLNPDAM1140
 1141 DEGFDDVSEL EPEVRLEVGH WTVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle