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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114195907, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVTRSQTGK TPKKMDRPGF VETPRRRVTR SSAVPSETNT DDASDSAVDV RGRSKSATRS  60
   61 RRTPARVKTE EPSDDERKPV ATNGHPEPAE KKARIIDGWE EGKDPKIDYS GHFEFGGSLG 120
  121 VLSMMIGFPL LMYYMWIGAT YYDGKFPRPA EGESMANFVA HLGHLAYEGA FPTLKAWAIY 180
  181 WSFFVFEGIC YLYLPGITVM GRPLPHLGGK QLPYYCSAVW SFYTSIILAL TLHFTGIFKL 240
  241 YTIIDEFGHL MSVAILSGFL VSFVAYFSAL ARGAQHRMTG YPIYDFFMGA ELNPRMFGIL 300
  301 DFKMFFEVRL PWYILLFVTM GAAARQYEVY GYVSGEVGFL LMAHFLYANA CSKGEECIVS 360
  361 TWDMYYEKWG FMLIFWNLAG VPLSYCHCTI YLANHDPATY RWNRIFLTFL YVAYLFVYWV 420
  421 WDTTNSQKNR FRQQERGTLV FRKTFPQLPW QTLTNPKTIT AADGSKILVD GWYGKARKIH 480
  481 YTCDLWFALN WGLVTGFNSP FPWFYPVFFA CMISHRALRD IQRCRNKYGE AWLEYERQVP 540
  541 YLFIPVSFIN FPCGSIYVFH PSIPGYPHAR FPGVVVFSEI YQVTGPVARF ARQIAGQGYI 600
  601 CAAPSSYHEF TGPEPLAYNA EDTDKGNQWK VSKKLAAYDE DASLCVDYLL SLPTCNGRVG 660
  661 ATGMCLGGHL AYRCALDSRV KAAVCYFATD IHSKTLAAGK NDDSLARAGD IKGELIMIFG 720
  721 KNDNHVPPEG RDLIRKTLHD KGVLFSFYEV AWAQHAFIRD ELSKGRYDPA ITKVCFEMLL 780
  781 ELFGRTLKLD LGEHDGKKLE IEDVC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle