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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115384104, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPGGPSPQ QLAAMQQQFA AEAAKRGMTP EEFAKQQREQ LNAEAAKHGM TTEQYVAQLR  60
   61 MRAIAAHQKQ VEAQRQNQGS PQPGQSGEAS AQQPQPQARV QQTTHQVPVN PSNPPDPKAI 120
  121 AVANFLRSQN LKTRTCIMDG QRKDLFKVKR AIRALESPAY AKAASKKGSL LPPVTDRASA 180
  181 ENAFKLLPLS LLALRVSKVD PHAGHNHAKP KNRVKGLWTV KIEQHQETDP MMHYVWLYEG 240
  241 PQWKQKVMAG AVVAGIFAIV LFPLWPIMLR QGVWYLSMGM VGLLGLFFAM SIFRLILFCI 300
  301 TVFAVPPGLW LFPNLFEDVG FVDSFKPLWG WQETKKKKKK SKKVTADDSK TEPAAATDTT 360
  361 PSATTTATPA PDTSGAVKRD LAARVEEADE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle