YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115384460, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIWDSFSGR KQSKGPDAFD PSTAQDATSF LSEVAIPDPT QLHPLAGLNQ DTLDYITLED  60
   61 SALDELPGSR SVLPSRGWSD DLCYGTGTTY LAALTLGGVW GLSEGLRKTP VTAPPKIRLN 120
  121 GVLNSITRRG PFLGNSAGVV AMVYNCFNSG LGYARGKHDS ANSIAAGALS GMIFKSTRGL 180
  181 KPMMISGGIV ASIAGGWAVV RKAFL

Type	Start	End	Confidence
Cytoplasmic	1	178	0.64
Transmembrane Helix	179	200	0.86
Non-Cytoplasmic	201	205	0.53