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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115491075, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSAPRIAPA ASRFIGLAAR QGPTVAASAG LTRGLSTTGP AKKEVTLLED KDNGFGFARS  60
   61 NPRPSKPRSK GVTEIRGPYY SVMGKRYLAD VLETMGTHVD GLKFAGGSFS LFPEKSLREL 120
  121 TDLAHEYGVY VSTGGWAEHL LTHPDPNSVF DKYLTKCKDL GFDVIELSSG FLSFPEDDWL 180
  181 RLVDKVHSYK LKAKPELGIQ FGAGGDTPAS GLEAIGTSDP GKLVNLGHKF LNAGVERLMI 240
  241 ESEGITENVT SWRTDVVSKI MKELPPERVM FEAADPKVYN WYIREFGIDV NLFVDHSQIV 300
  301 QLSCLRHGIW AVEMVGPFWG KKRTSPSPIS LSLALPLPQP LLPHLTLVNC LLYSSILKRC 360
  361 LVRRSYSCAG SDWQLIDPRD PAFRPYRSSS FTPYSASIVD LHDYLLSLRG LPRPLTMPRA 420
  421 STAPGARLRC RRACDSCKRR KQKCNGEQPC TICVQRHKES ECHFSDKPAR LLKPSNASKE 480
  481 TMLLSEHLVA TPQRQTAMDR LLNSLEDQGA TMEHEAAEDK DGIAPVPKVA RLLRDGQGKF 540
  541 MYIGDSASLS FLQSVRRIVS SSIGRCDFTE DNSRHSMLEA FQSNSSTQMR TLIEPPNNDE 600
  601 AQQLARQFLL ATSPLLDLFD LNEFHPRLAN WVENPTGDED TVSSIFYLVL AIGAQVSSTD 660
  661 QSTAEQYFLS GRRLAFAAFT ETPSISTIQS YILITMYMLG ACRRNGAFMN LGIALRAAYA 720
  721 VGIHRKEANV LFCTRERRAR ERVWKSLRMM DLFLSASLGR PPATSDFDCD PRQDMFPAED 780
  781 QQRLQPDEQL SLTVVWLCRI FERILTEVYM RQVVSISVAE AVSNQHRAWV RNVPAFLQMQ 840
  841 TEQNGTKTLE GTLAAAHVFG SYYWSIILLT RPFLIYRVAQ YVKSKNESTG LSESNRIALF 900
  901 SDACVYSALR GLNIIDEVAQ HKNLPRRLPF LMNSVFNSAV VLGAAFFGDY DNLLPLEEGM 960
  961 NKAEKFLELL ATHDPHACRY FQIIKYLRGA VAEYVRRRNR QWMERRSRQV DQLFGQVGPG1020
 1021 NESSPMDNTT RTNRRPESAV PSPLSPEKYT GSLPPQSVLQ SPQPPQPTPT PAQPEHDIWD1080
 1081 TLCGADGIAS LPYDTTISSL TTSGIPVGCS PGGTILGGAL DRQGISDPRG NTPLSDVLLP1140
 1141 ENSLLYLTED VPVFGIWEDA TL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle