YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115491905, gi...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFIIPIST RRALIYSRPL RKDLPKELSW TDKITNKAAQ TWAKWEEAEK GWKMHLVSWG  60
   61 NRVQQRIPYQ EWGLKSIPSL NAQRRLDPSH GSKKIDVLFP GNAINPEKLQ SLLARLATER 120
  121 QDLHRQRMWW SFIAAPFTAP IALLPVIPNI PFFYLVYRGW SHWRALNGSR HLEYLVKNNL 180
  181 LNPISFPGLE QLYAKRVSRT LENIEPEKPS ASMVEDVEKS DDTLLLRMKD AKKLASILEA 240
  241 PELALEAERA IIQVEEQLKA QESSEGKEKD TKKGA

Type	Start	End	Confidence
Cytoplasmic	1	128	0.76
Transmembrane Helix	129	152	0.81
Non-Cytoplasmic	153	275	0.80