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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115492629, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.25
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDYTYDDK GQFFPFFVLT LSGLVTLPLT YNLLKPSKEL ENTAPRIKSD FKPKDGDLIE  60
   61 AQKRKRLRKE RRIKRIITVI VGYAVMAWMV YLIIVTARTT PKVWDPYDIL GISRSADEKA 120
  121 ISKHYKRLSL LYHPDKVRPD PSKNETMDML NDRFVELTKA YKALTDEEVR NNYIQYGHPD 180
  181 GKQSFSIGIA LPQFIVTEGN GKYVLLVYGG LLGVLLPYIV GRWWYGSQRY TKERVLVASA 240
  241 GNIFREYKED ILENGIVNAL SSGDEFKEML AGRHPDAGLA KLEKKVLADD SVLSPQDRKT 300
  301 LKELDDSTRR KTLALLWAYL GRIDLEDSTL NGEKYEVAPI ALSLNEAFTA ISLAFGNARP 360
  361 ILGSFRTSQN IIQAVAPESS PLLQLPYFTN EVVKSVEGAD AKDHYTVQKF MKLSEDKRRA 420
  421 LTIGAGLLSE KQYNAAISVA KQLPVLEVSK AFFKVMGEKV ITPSSLVQLV VKARFIPPGC 480
  481 TGVPEVDPID LEDIDPDEDD LDALMGRKPA KNKTIKTANG QKVESKIEKI QPPLAHAPYL 540
  541 ARDHSPRWHV FLADGKQGKM AVPPFTFTTF DKPLFDEAGK PTFNVQTLKM QFQAPPQVGD 600
  601 FTFVMHLLCD SYLGLDTKME VTLHIDDPAK AAALDEEDDI SEPDEDSIAG QMHALKTGQA 660
  661 PKKKARKPSD ESSEEESDTE GDAGDTSDTN TETDVDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle