YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157785121, gi...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYIKNILYF LHNLSYKEEF ERNTSPCTLA YIDNHTDAST GLTYKLPLKA GYPRSLLRIL  60
   61 IFIALSFNLS ACLPTIFTVA TTTGIVASKD QPMSQTLNDS RISAGIKTDL VKNNFRDLGA 120
  121 KIKVTVSQGR VLLTGNIQKE LDALKAVNIA WNQKGVKEVI NELKVNKNSN HFDLAQYTKD 180
  181 CMITTQIKAK NLVRKDIKFA NYTIITIDNI VYLFGVARSE EELEKLASIA SKIKGVEKVV 240
  241 CYAKIMDNFN KHEDYDTTP

Type	Start	End	Confidence
Cytoplasmic	1	58	0.88
Transmembrane Helix	59	81	0.83
Non-Cytoplasmic	82	259	0.96