YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119946648, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRKYFYSNH SQVSFMKKIS LLVTALIFSF NLFANPTITP SAPEIGAKGY LLIDFNSGKV  60
   61 LSENNSDVRL NPASLTKMMT SYIIGQEIKS GNLSPDDKVT ISEKAWSKNF PESSKMFIEV 120
  121 GKEVSVADLN RGIIIQSGND ACVAMAEYIA GSEGAFADLM NSWAAQLGMN NTQFKNSHGL 180
  181 TAEGHYTTPH DMAILAQALI NDVPDEYLIY SEKSFKFNGI DQPNRNALLW DKSLDVDGIK 240
  241 TGHTNEAGYS LISSATKDGM RLISVVMGTR STSARLTESK KLLNWGFRFF ETLTPYNAGD 300
  301 QLANERIWMG SQPMIRLGVK DDTPITLPRG EAKNLTANFI IENELRAPIQ KGDVVGKVNY 360
  361 SVTGQQTVDD EPIATYDLIA LETVEEGGLF SRLIDYIKLL FIGWFS

Type	Start	End	Confidence
Signal Peptide	1	34	0.73
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	406	0.99