YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|106772731, gi...
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLLNILLAI AWSALTGQFS PGDLAFGFVL GYAILWSLRR QLWGERYFTK VPQVIYFVAY  60
   61 VAWQIILANL NVARTVLFTP KEQIRPGIVA IPLDIRTDAE ITMLANLITL TPGTLSLDVA 120
  121 DDRSCLYVHT IDVGDPEQFR REIKDGFERL VYEVFN

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.42
Transmembrane Helix	14	36	0.58
Cytoplasmic	37	53	0.37
Transmembrane Helix	54	68	0.52
Non-Cytoplasmic	69	156	0.67