YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148655908, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTPKTQSAG TISEAQTVPE SGAEDRVAAF FGRYGRHLAL LQATVATCGS LFMSEALGWP  60
   61 PCVLCWYQRI LMYPLVVLIL VGILRRDHGL HLYVLPLSLF GACVSLYHYL LVKTDWLPPP 120
  121 PCVDGIPCTV DYLDILGFIN VPFMALTAFL IISFLMGATV VSEPADSDES PSLRDGQALA 180
  181 AYAIIALVAV AFIGWGMVI

Type	Start	End	Confidence
Cytoplasmic	1	37	0.95
Transmembrane Helix	38	58	0.90
Non-Cytoplasmic	59	64	0.82
Transmembrane Helix	65	84	0.92
Cytoplasmic	85	91	0.80
Transmembrane Helix	92	111	0.97
Non-Cytoplasmic	112	140	0.90
Transmembrane Helix	141	161	0.90
Cytoplasmic	162	177	0.88
Transmembrane Helix	178	198	0.93
Non-Cytoplasmic	199	199	0.99