YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|158320102, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METKSLKIQG MTCASCAASV EKATKKLQGV KESNVNFATE KLNITFDETK VSVGDIQAAV  60
   61 EKAGYKAISD SANRTLKIEG MTCASCAQSV EKAVKKLDGV NEASVNFATE KLNISYDSSK 120
  121 VKTIDIKKAV EKAGYKAIEE ETTVDADKER KEREMKVLWR KFIVSAIFTI PMLYITMGHM 180
  181 LGIHLPEIID PMMNPTNFGL AQLILVIPSV IAGYKFYTVG FTALIRRSPN MDSLIAIGTA 240
  241 AAFVYGIFAI VQISEGNIEY ANDLYFEAAS VIITLILLGK YLESVTKGKT SEAIKKLMGL 300
  301 APKTAIIIRD GKEVEISIEE VEVGDVIVVK PGEKMPVDGV VVEGNTSVDE SMLTGESIPV 360
  361 EKNAGDNIIG ASINKNGTIK YKATRVGKDT ALAQIIKLVE DAQGSKAPIA KLADIISGYF 420
  421 VPVVIVLAIA SGLAWYFIGG ESLLFALTIF ISTLVIACPC ALGLATPTAI MVGTGKGAEN 480
  481 GVLIKSGVAL ETAHKIKTIV FDKTGTITEG KPKVTDVVVA NGITEDELLQ LTASAEKGSE 540
  541 HPLGEAIVKG AEEKGLEFKK LDKFAAIPGH GIEVTIDGKV ILAGNRKLMV DRKIAIDKLE 600
  601 DASNKLAEEG KTPMYVAIDN KIAGIIAVAD TVKENSKRAI EKLHKMGIEV AMITGDNKRT 660
  661 AAAIAKQVGI DRILAEVLPE DKANEVKKLQ AEGRKVAMVG DGINDAPALA QADIGIAIGS 720
  721 GTDVAMESAD IVLMRSDLMD VPTAIQLSKS TIRNIKENLF WAFAYNTLGI PVAMGVLHIF 780
  781 GGPLLSPVLA ALAMTFSSVS VLLNALRLKG FKPVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle