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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|158321697, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDNREKHSM APRGNRGHGG GPGGPMMRGS SEKVKDFKGT FRRLLRYLKP FQFRLIVVLI  60
   61 TAILSTGFSI LSPKVIGLAT TKLFEGMTNP GAGVDFDYIV KILMLLGVLY IASAIFTYVQ 120
  121 RLVMATVAQK TVYNLRNEVN HKLSKLPLKF FDAHTHGEIL SRVINDIDNI SSTLEQSITQ 180
  181 IITSVITLVG IVVMMLIISP TMTLILVVTL PLYFLSTKSI AKRSQRYFAA EQKTLGELNG 240
  241 HIEEMYTGHK IVKVFSREKE SLDRFNQIND ELFESGWKAQ FISGILMPFM TFINNIGFVL 300
  301 ISVGGGILAI RNGIQIGDVQ AFIQYSRQFT QPIIQTANIA NILQSTIASA ERVFEILDET 360
  361 EEVSDSNGNT ELANPKGEVN FRDVSFGYKK DELLIENMNI DVKSGQTIAI VGPTGAGKTT 420
  421 LVNLLMRFYE INSGSIQVDG VDIRNLKRER LRNIFGMVLQ DTWLFNGTIR DNIAYGKKDA 480
  481 TEEEIINAAK AAHAHYFIRT LPDGYDTILG EEASNISQGQ KQLLTIARAI LADPAILILD 540
  541 EATSSVDTRT ELYIQKAMNT LMEGRTSFVI AHRLSTIKDA DLILVMNRGS IIEKGNHKEL 600
  601 LERDGFYAEL YNSQFTRGKR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle