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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108882080, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEIGLFLGK WERKITFHVA SPANEIWPVE RPDGMPQITA LEVMCGKDHM DVHLSFSAPF  60
   61 EGIVSSKGQH SDPRCIYVPP STGKTFFTFR ISYSRCGTKP DLNGQFYENT VVVQYDKDLL 120
  121 EVWDEAKRLR CEWFNDYEKT ASKPPMVIAD LDVIQLDFRG DNVDCWMEIQ QGKGPWAPAV 180
  181 SGIVPLGSTM TLVVAINDFR GEFDMRVKSC VASDGAGHVI KLSDEYGCVL RPKMISRFLK 240
  241 ARAPDDKASV ITYAFFHAFK FPDALSVHIK CKVEICRHGC LDHCQHSGTA GGPGKLHSLL 300
  301 DRKDTLDSHQ NTNDILQGSD EEEAASSNQD VFYDDIIHTD KNANQPPPPP PPGPKKPILP 360
  361 PIQKKKDSGY LQYHHHNRDP LDELEQLFLN DHSMMPAEML KKQPPPPPAP QMQHQPHPQS 420
  421 LQQKQLHKST PEDEKFPHGP RQMDAEKRMG LPAVAGPRSL NLDAEDVRNP VYVNEVPKKR 480
  481 VRRSIKITDR KIRSTDVGVS GIYDVISEAD LAFNPDGKQE AVTVFQGKIT EEVVYGICMP 540
  541 VPGFSILFIL VISATIISAL IAGSLLYRYQ LQKEIMAQQA SGVTPNHLPP NNFATWMTLR 600
  601 LFRTRQHHAA AAAAAAASMA ANGVRASMDV TTTAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle