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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88772635, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLKFFPLSP LILAIGLTGC QLTDNNNDSA QLESNENASL EACSEIHNTE EAISDCEIAR  60
   61 DGVIDVVHPN DDVLEEGAEL TDTPDLHTQA VVTNVWERAS TNFALPIPDE KRISSQRKWY 120
  121 LKHPEYMARV VKRAKPFLYY IVEEIEKRDM PMELVLLPIV ESAFDPFAYS HGRAAGMWQF 180
  181 IPGTGKRFGM PQNWWYDGRR DVVASTKGAL DYLTYLNDMF DGDWLHALAA YNSGEGRVQR 240
  241 AIKANIRAGK PTDFWNLNLP KETRAYVPKL LALADILKNK DEYAYSWPEV ENVAVIEVVD 300
  301 IGSQVDLAFA ADLAGMSLKE LHALNPGFNR WATSPDGPHR LVLPLVKAAA FSQALAKIDQ 360
  361 KERLNWVRHT VKSGDSLSKI AKQYHTTVKV LKRINELDSS MIRVGQAIMV PVALQELDSY 420
  421 TLSQEQRLAS LQSGSGSKQK VRHTVKSGDT LWDIARKYKI STKQLAKWNG MAPGDMLHPG 480
  481 KTLVIWQQGT PQNGVTKKLT YTVRNGDSLS RIASKFNVKV SDIGKWNSLN TKRYLQPGQK 540
  541 LKLYVDVTRS SASG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle