YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88790354, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFNFEALLV LLTFLTGAIW LWDWRQRRSQ AQRRGAAAAE PRTKIGWWIE LSRSLFPVIL  60
   61 AVLIIRSFIV EPFRIPSGSM IPTLLPGDFI LVNKFSYGLR LPVLHTRVFG DGQPERGDVV 120
  121 VFRYPEDPSQ DYIKRIVALP GDAIRYEHKK LYINGEPAPQ ELVGRYPPDP AAVVKREHLE 180
  181 GVNHEILLYK NARDGGFTFK VPPDEYFAMG DNRDRSSDSR YWGGVPANNL VGKAFLVWMS 240
  241 WDWQDSTINW GRIGDAIH

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.85
Transmembrane Helix	7	24	0.98
Cytoplasmic	25	44	0.96
Transmembrane Helix	45	69	0.81
Non-Cytoplasmic	70	258	0.74