YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88918906, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDATATAPL NEATTKVKSK FREYAESIIW AIVLAFIIRS CVVQAFKIPS GSMENTLAVG  60
   61 DHLFVNKFIY GIKLPFTDTR ILTLRDPMRG DVMVFEYPED RSKDFIKRVI GVPGDEILVR 120
  121 DKHVYVNGVL YKNPHEVHKE AAVLSRDMAP RDNFGPVRVP AGSYFMMGDN RDRSYDSRFW 180
  181 GFIKDSDIRG KAFIKYWSWD QASWRVRWGS IGRLIE

Type	Start	End	Confidence
Cytoplasmic	1	26	0.61
Transmembrane Helix	27	46	0.63
Non-Cytoplasmic	47	216	0.92