YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MTNA_GEOUR
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRTIEWRD NKVVMIDQTR LPGEEVYNEY TDFQSVAEAI RGMIIRGAPA IGVAAAMGIA  60
   61 LGAREIIADT HESFFRQLDN VCNVMARTRP TAVNLFWAIE RMKRVAESHR DKDLNSIREI 120
  121 LKAEAIRIEE EDLEICRAIG RNGAPLIKEG ATILTHCNAG GLATAGYGTA LGVIRAAHEA 180
  181 GKRIQVFADE TRPWLQGARL TSWELMKDGI PVTLISDNMA GYFMRKGEID VCVVGADRIA 240
  241 ANGDTANKIG TYSVAVLAKE NKIPFYVAAP VSTLDLSLKS GEDIPIEERH SREVTHLQGL 300
  301 PVAPEGVKVR NPAFDVTPAR YIAGIITEKG VVRGDYEKEL RALVGR

Type	Start	End	Confidence
Cytoplasmic	1	43	0.77
Transmembrane Helix	44	68	0.67
Non-Cytoplasmic	69	346	0.94