YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88941515, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSGRAGDGV RREPPAGLMT PVSIRQPRRD RRARFRHFRS GHGRQASALP RRHPLDIPDI  60
   61 SATTRRRFMI KTLAAIAFFG SLGCWARYGQ TIFMQNLFGR GFPVAVLSIN VLGSFLIGFL 120
  121 FVLTAERVAI DPAIRTGVLT GFLGGYTTFS TFELETLMLV ENGEIVKSAL YVLLSVVLGF 180
  181 IGAVLGVYIA RNV

Type	Start	End	Confidence
Cytoplasmic	1	67	0.99
Transmembrane Helix	68	89	0.90
Non-Cytoplasmic	90	101	0.85
Transmembrane Helix	102	123	0.93
Cytoplasmic	124	132	0.83
Transmembrane Helix	133	152	0.86
Non-Cytoplasmic	153	168	0.80
Transmembrane Helix	169	190	0.95
Cytoplasmic	191	193	0.87