YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134298143, gi...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVIRAFRIK KRYVLGFITL SILFFQLYQM VLVKIEEKNI TALSYVLANK TIVVDPGHGG  60
   61 RDPGKIGLSG VPEKEINLEV SKRLAAVLGQ MGAAIIMTRE ADVDLSDSSA SGWKSKKQQD 120
  121 LTRRTDMANE RKADLYISVH CNAYTSPREH GAQVFSQPGS EDSKRLAECV QSEMAALLKN 180
  181 TNRKAKQVDY FALRKTKMPA AIVEIGFITN PKEDELLRDP LYQSKVAWSI AAGIIKYYAD 240
  241 LEERENQKID EKNKEILETF RQQPGQYIPA P

Type	Start	End	Confidence
Cytoplasmic	1	12	0.80
Transmembrane Helix	13	32	0.80
Non-Cytoplasmic	33	271	0.99