YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134051145, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENGFDAII VGGGLAGSTA AYVLAQEGLE VLLIEKGNYG GSKNMTGGRL YAHSLEKIIP  60
   61 NFAEEAPVER RVVRERISMM TEKDAVTMDY HSPRLAETGS DSYVVMRGKF DRWLFDKAEE 120
  121 AGAMVAAGIK VDQLIVENNQ VTGVICGGEE MRANVVILAD GVNSILAEKA GLRKRVKPSQ 180
  181 VAVGVKEIYE LPAKVIEDRF GLTGDEGAAW LFAGSPSNGL VGGGFLYTNK ESISIGLVMG 240
  241 LEHIGESNKT IDEMLVAFSN HPEVAPLIKD GKLLERSGHV VPEAGLSMVS TLYGDGFLIC 300
  301 GDAAGFCLNI GYMVRGMDLA ITSGELAAKA VLVAKEKGDF SSASLKSYKE MLDKSFIMND 360
  361 LSVYKNFPAF MENPRIFNQY PTMVSNIMAE MFVVDGKPAV PLRKKVMKHL KTVGLINLAK 420
  421 DGLKGVKSV

Type	Start	End	Confidence
Signal Peptide	1	25	0.50
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	429	0.96