YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89092931, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQHLIAIAIG GALGALGRYW VSGLLNNAEH RIPYGTLTCN VVGSFLMGIC FVLILEKSRL  60
   61 SPEMRPLLMV GFMGAFTTFS TFSLETIAML QEGHVMSAAI YISLSVLLCL IALYGGLWFT 120
  121 RLF

Type	Start	End	Confidence
Cytoplasmic	1	4	0.73
Transmembrane Helix	5	22	0.85
Non-Cytoplasmic	23	31	0.79
Transmembrane Helix	32	55	0.91
Cytoplasmic	56	66	0.88
Transmembrane Helix	67	89	0.91
Non-Cytoplasmic	90	97	0.80
Transmembrane Helix	98	119	0.94
Cytoplasmic	120	123	0.82