YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89081559, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVTVFGIGY VGLVQAAVLA DVGHDVVCVD VDQNKVDNLK KGLIPIYEPG LTPIVESNFA  60
   61 EGRLRFTTDA AEGIAHAEIQ FIAVGTPPDE DGSADLKYVL AVAETIATHM NSPKIIVDKS 120
  121 TVPVGTADKV SAKVGSVLST RNERIDYHIV SNPEFLKEGA AVSDCMRPDR IVIGTDSQHV 180
  181 EEQMRELYAP FNRNHDRMIF MDVRSAELTK YAANCMLATK ISFMNEMSQL AERLGADIEN 240
  241 VRRGIGSDER IGYHFIYPGC GYGGSCFPKD VQALVRTADE IEYDAQLLKS VESVNYKQKE 300
  301 VLFDRVFNYF NGDLAGKTIA LWGLSFKPNT DDMREASSRV LMEKLWEQGA KVRAYDPEAM 360
  361 EETQRVYGVR NDLDLVGTKE SAMQGADILV ICTEWKVFRA PDFDQIKRSL TYPVVIDGRN 420
  421 MYEPEIVERH GLEYFGIGRG RSITA

Type	Start	End	Confidence
Signal Peptide	1	20	0.87
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	445	0.99