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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89085953, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLQGIAAS SGIAIAKAYR LVEPDLSFSK KTVEDADNEV GRFQQALATS KSELEAIREK  60
   61 AEKDLGADKA AIFDAHLLVL SDPELISPIE DKIKTEKVNA EQALKETADM FVSMFEQMDN 120
  121 EYMKERAADI RDVTKRVLSH LLGVQVVNPS MIAEEVIIIA EDLTPSDTAQ LNRQFVKGFT 180
  181 TDIGGRTSHS AIMARSMEIP AVVGTKTATE EIQNGDMVIV DGLTGQVHVN PTPEAIESYK 240
  241 EQNAAFEAQK AEWAKLVNEK TVSADGHHVE LAANIGTPKD LKGVINNGGE AVGLYRTEFL 300
  301 YMGRDQLPTE EEQFEAYKAV LEGMEGKPVV VRTLDIGGDK ELPYLNLPKE MNPFLGFRAI 360
  361 RLCLEEQDIF RTQLRALLRA SSYGNLKIMF PMIATLDEFR QGKAILEEEK QKLSSEGVKT 420
  421 ADKIELGIMV EIPSTAVLAD QFAKEVDFFS IGTNDLIQYT MAADRMNERV SYLYQPYNPA 480
  481 ILRLVKMVID AAHKEGKWAG MCGEMAGDET AIPLLLGLGL DEFSMSATSI LKARSQILRL 540
  541 STEEMKELAE KALQMGTAEE VVAAVKQATQ K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle