YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89200120, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYLIVGLAG ILGALSRYYL GLSIDVLWHH PFPLATLFIN LIGCFLLSWI ATYISRLNIF  60
   61 PSEVVTGIGT GFVGSFTTFS TFGVETMKLI NQSAWSIAIV YVLCSIFGGL FMSSMGYKLG 120
  121 NILFTKRAVI TKKGD

Type	Start	End	Confidence
Cytoplasmic	1	4	0.56
Transmembrane Helix	5	21	0.70
Non-Cytoplasmic	22	31	0.59
Transmembrane Helix	32	53	0.90
Cytoplasmic	54	63	0.64
Transmembrane Helix	64	84	0.89
Non-Cytoplasmic	85	93	0.76
Transmembrane Helix	94	117	0.88
Cytoplasmic	118	135	0.82