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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89200166, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQIKKAAVL GSGVMGSGIA AHLANIGIPT LLLDIVPRAL TKEEEAKGLT LEHKSVRNRF  60
   61 SNGALQKLVK QKPAPLAVKD NLALITTGNL EDDLERLAEV DWIIEVVVEN LDIKKQLFEK 120
  121 VDAVRKLGTI VSSNTSGISV EKMAEGRSDD FKKHFLGTHF FNPPRYLKLL EIIPTNDTDP 180
  181 QVLNFMKQFG EDVLGKGVVI AKDTPNFIGN RIGTYGLLVT LREMMERGYS VGEVDSVTGP 240
  241 LIGRPKSATF RTLDVVGLDT FVHVANNVYE NVQEEERDVF KVPTFMHEML DRKWLGSKTG 300
  301 QGFFLKKGKE ILELNPKTME YEERKKLKAA SVELSKQEKG LANKLKALVY AKDRAGELLW 360
  361 NIITPTLLYS AKLYKEIADD IVAIDQAMKW GFGWEQGPFE IWDAIGVEKS VQKMEENGKV 420
  421 VPAWVKEMLQ NGFATFYKHD SGESYYYDNG EYKRIERNKK AISLKQLKEK HGVIKKNSGA 480
  481 SLIDLGDGIL CLEFHSKSNA IGMDITQMIN YAVDEVEKNY KGLVIGNQSK NFCVGANLAM 540
  541 ILMEAQDDNY FEIEWVVKSF QDAMMKIKYC SKPVVAAPYG MTLGGGTEVC LPTASIQASS 600
  601 ETYMGLVEVG VGLIPGGGGN KELYIKHLNK MAKGVEFDLQ KVANKVFETI AMAKVSTSGQ 660
  661 EAISHNFLGD KDGISVNGDH LLYDAKQKAL ALYEAGYKPP IRKKVPVVGE TGYATLVLGA 720
  721 EAMHLSGYIS EYDLHIAKKL AYVIAGGKVP YGTEVDEQYL LDIEREAFMS LISEMKSQAR 780
  781 MQHMLVKGKP LRN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle