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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89203623, gi|...
Protein type: Transmembrane
Type Confidence: 0.56
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKGGVRTRN VVGHNVLRSR MKKGLYNVFA MSIALQVVMI PSDSFAAPLE KTIELSTDEQ  60
   61 ALKSIENHMK HEDGRGDSQE ANSEVQGDFL VHIKKETSIY ESSDLKEWTG KNFSKQVVKA 120
  121 SKRKGNAYYI QTRNEAGWIQ HIDNHVEVRN IYPLSNKRLV IHEETALYSS PFDSFQEEST 180
  181 LQPQTVVAIG QAGDWFQVET NEGKKWIHSS NVAFEGTKAS LIQNNEMPTY KKREAGLYYA 240
  241 APSALKIGSV YGVPFTEWIV PKGNDNIRPG YAMDPKYITI HETDNYSVGA GARNHAQYLY 300
  301 NQATGDTDRS ASWHFTVDDK EIYQHLPLNE NGWHAGDGSN GTGNRQSIAI EIAVNQDGNY 360
  361 DKAVENARKL TAYLMGELHI PIENVKKHQY WSGKICPAIM IQRGAWNAFL QGAKSYYDEN 420
  421 HQDDITGGWY EQDIRELAAK GIMVGDGNGS YWPNRLVTRG EFANFISRSL QLPEGSSTFT 480
  481 DLNEAHPSLV DGINRAASAG IINGRGDNTF DPNDTIKRDE VVIMIDRALQ YKGITGTLVE 540
  541 VPFSDQNLAY DKQALKRVYG LGIVKGNENN EFMPKGTATR GESAAFINRM LYVIER

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle