YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89208509, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHSKKIFMF CIMILMVIIA GCSKEEKKEN DTSAKAKDSY TVKHAMGETT VNGTPKKVVV  60
   61 LTNEGAEALL AVGVTPVGTT KPRAGDEWYP HLAKDLKDTK VVGTERDINL EAVMKLKPDL 120
  121 IIGNKMRHEK IYEQLNEIAP TVYAETLRGD WKENFTLYTK AVNKEKEGQK ALEDYKKRIE 180
  181 GMKEKLGDKL NSKVSIIRFV PGDVRIYQKN SFSGAVLNDI GFKRPPLQDK DEFAIKGITK 240
  241 EQIPNMDGDY IFYFTSDKDA DKNNEGTTLA KEWTEDPLFK QLQASKDNKV FQVDEVIWNT 300
  301 AGGIKAANLM LDDIEKYFLK

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	320	0.99