YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90327016, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLGFLVST VFDLYIMVVL IRIWLQWARA DFYNPFSQFV VKATQPIVAP LRRIIPPIGG  60
   61 FDLATLIFAY VLSIGKFLTL QLALNGGIVF SPDFLWIGAL SLLKAAGGLL FWILLLRAIL 120
  121 SWVSQGRNPI EFVMHQLTEP LTAPIRRVIP AMGGLDLSVL VLFLGLQFAN FLMGDLIGPV 180
  181 WFQL

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.70
Transmembrane Helix	6	25	0.82
Cytoplasmic	26	57	0.82
Transmembrane Helix	58	80	0.82
Non-Cytoplasmic	81	93	0.82
Transmembrane Helix	94	116	0.88
Cytoplasmic	117	151	0.85
Transmembrane Helix	152	173	0.85
Non-Cytoplasmic	174	184	0.81