YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90412085, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANTFSLILV LATLFTGLIW ALDRFVWAPK RQLKIDAAAA NAGDQVDVKT LETVAPQPSW  60
   61 IESTSSMFPV IALIMVFRSF IYEPFQIPSG SMMPTLLIGD FILVEKFAYG LRDPVFRHKL 120
  121 IETSEPERGD VVVFKYPPQP NIDYIKRVVG MPGDTVRYSA DKQICIAPKG TTDCKVVPLS 180
  181 NMTDSEFTQN MTRLVRFNEK LGDVDHQILV NPLKRDRTLA YQPRPGITEW VVPEGEYFMM 240
  241 GDNRDNSADS RYWGFVPEAN LVGKAVAIWI SFEFERSTDS VLPSWIPTDV RFNRIGSIN

Type	Start	End	Confidence
Signal Peptide	1	21	0.90
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	299	0.93