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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90327661, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIKLKELLA PKLSRRNFVK TGSVLGSLAA VASSVTLPFK SNSAFAATST APTEDKVVWS  60
   61 SCTVNCGSRC PLRMHVSDGE IKWVETDNTG NDEYGHHQVR ACLRGRSMRR RVYNPDRLKY 120
  121 PMKRVGKRGE GKFKRISWDE AFSEIAASIT TIRKDYGNEA IYLNYGTGTL GGTVTKSWPP 180
  181 GGSLIARLMN LNGGYLNHYG DYSTAQIAEG LNYTYGGFAA NNSPSDLENT KLIVQFGNNP 240
  241 AETRMSGGGV IHHFMEGKEK SNARMIVIDP RYTDTAGGRE DQWIPIRPGT DTAFIAAMAH 300
  301 VMIKEGLVDQ AFLDKYCVGY DEKTLPASAP ANSDYKSYIL GLGNDEVEKT PEWASSITGI 360
  361 PADIIIKAAR EIGSTKPCAI IQGWGLQRTA NGEIASRAIA MLALLTGNVG LNGGGTGARE 420
  421 SSSSIPFVRF PTLQNPIEAS IPMFLWTDAI FRGPEMTATA DGIRGKEKLD VPIKFIWNYA 480
  481 GNCLINQHAD INRTHDILQD EKACEMIVVI DNHMTSSAKY ADIVLPDLTT SEQSDFCMDA 540
  541 SAGNMPYFIF ASQAIKPQFE AKSIYDICTG LAQKLGVEET FTEGRDQEGW LRHLYQLTRA 600
  601 QDPSLPTFEA MREQGIYKRF VKEHFVAYKD FRENPKANPL RTPSGKIEIY SERLASIGQT 660
  661 WELDADETIH PLPVYTPNFE GWEASKQGNY PLQLTGFHYK SRTHSTYGNV DILKDAAKQE 720
  721 MWLNPLDAQT RGIKNGDLIR IFNDRGEVHI NAKVTPRMMP GVVALGEGAW YAPDGQRIDH 780
  781 SGCINVLTTQ RPSPLAKGNP QHTNLVDVQL VKKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle