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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91215719, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLINTTSTL GSDREINKSS HITYICIHYF KAMLEKKIKS ILFSTRLMAV LFIVYAVSMA  60
   61 VGTFVENSYT TITAREWIYD AWWFEIIMVF FVINFVGNIF RFKLFQKKKL TTLLLHLSFI 120
  121 LILVGAWVTR YLGEEGIMPI REGEVASTML SEKTYLSTFI DGEIDGEPLR KKEDFRISLG 180
  181 PGITEGKKIN TDYDGNSVQI EFLEFIQGAE EGIIEDEEGV NFLKIVESGE GERHDHYLET 240
  241 GEVANIHNIL FAFNKQTDGA INIIGTNESG FTIDSPFNGD WMRMADQERG QLVEDSIQDL 300
  301 QMRSLYNLGG MQFVIPDPSI KGRYDLVQKE IAKNNDPDGI FMQITANGQT EKVGLLGGKG 360
  361 FQMDMKKVNV GDHDVYLSYG SKNIELPFAL KLNDFIAKKH PGTEDRPQPS YESFMSKVEV 420
  421 VDGSDSYPYD IYMNHVLDHQ GYRFFQSSFD PDEGGTILSV NNDWWGTWIT YVGYFLLYLG 480
  481 MMAIMFDRGS RFGDLRKKLE KIKMKKERLA GILILFLGLS GFAQTQNGNV VEDSNKPEDT 540
  541 QVTSSNHDPN MIQEVDYEKV IKLIKANTVD KDHAAKFGEL VIQDFGGRMK PINTYSSELL 600
  601 RKLGKKDNYN DLNSDQVLLS MIENPAIWYS APLISIKAKN DSLHHVLGVQ ENKKYVSLTD 660
  661 FFKMDGQYKL GEYLDAAYKA PVPNQFQKDF ITVDEKVNLI YNTLQGKQFR IFPVPEHSNN 720
  721 KWVSYSELDD EKYFAGVDTL YTKQILPLYM QSLRSARQTG DYEQSNELLL SLKSFQNKYG 780
  781 GEVMPKEGRI KAEILYNKID IFNLLFQLYL YASLIMIVFV ILSIFKQNKL NKITITISKI 840
  841 LLVSLFLVHT GGLAARWYIS GYAPWSNAYE SMIYVAWATM FFGLAFGRKS DLTMGSTAFV 900
  901 TSIILMVAHW NWLDPSIGNL QPVLDSYWLM IHVSVIVGSY GPFALGAIIG LVSLILIIAT 960
  961 NKSNFKKMKL NIQELTIINE LALTVGLIML TIGNFLGGQW ANESWGRYWG WDPKETWALI1020
 1021 SIFVYAFVIH MRLVPGLRGL FAFNWAAVIA FGSILMTYFG VNFYLSGLHS YASGDQIISY1080
 1081 QFIIIALIVW VLIGFAARYK YKKYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle