YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91191506, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSLLALSL LAATSAPVMA ADYSDGDIHK NDYKWMQFNL MGAFDELPGE SSHDYLEMEF  60
   61 GGRSGIFDLY GYVDVFNLTS DPGSDKAGAE KIFMKFAPRM SLDAVTGKDL SFGPVQELYV 120
  121 ATLIEWGGNS GVNSQKIGLG SDVMVPWFGK VGVNLYGTYD GNKKDWNGFQ ISTNWFKPFY 180
  181 FFENGSFISY QGYIDYQFGM DDAAGNKFGS TASNGGAMFN GIYWHSDRFA VGYGLKGYKD 240
  241 VYGIKDTDGF KSTGFGHYLA VTYKF

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	265	0.99