YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91188385, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQTFFAKAG RITDAIEETL IAFFLGAMTL LTFANVIFRY VFNDNILWAL ELTVFMFAWM  60
   61 VLVGASYGVK KHFHIGVDVI INIVPEGKRK ALALFAAMCC LAFSILLLIG AWNYWYPFAT 120
  121 DRAWYETDDI PMPEMLQFMA DWLNEGERYE KLPRFIPYFA LPLGMALLTF RFVQVTWQIA 180
  181 TGKLDRLIAG HEAEEELESL KAEMSDAEDV MAPKASQDAK NKEQ

Type	Start	End	Confidence
Cytoplasmic	1	19	0.96
Transmembrane Helix	20	41	0.92
Non-Cytoplasmic	42	46	0.86
Transmembrane Helix	47	69	0.90
Cytoplasmic	70	90	0.94
Transmembrane Helix	91	112	0.94
Non-Cytoplasmic	113	154	0.95
Transmembrane Helix	155	175	0.86
Cytoplasmic	176	224	0.94