YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148653690, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKTSGNTQS SSDTVETKPA YATATPGLSK RPRLIANGPR ALMWYLLSLL VIGLDQWTKW  60
   61 IANTKLNFHE PVPVIEPILN WTLAYNYGAA FSFLADQGGW QKWFFAGLSL AMSVFLVVYL 120
  121 TRAPRQAKLL NVGLALILGG AIGNLIDRVR IGKVIDFIHV HYADVWHYPI FNIADIAICV 180
  181 GVAIVVIDML FLEGKRNAKY QA

Type	Start	End	Confidence
Cytoplasmic	1	40	0.92
Transmembrane Helix	41	58	0.92
Non-Cytoplasmic	59	99	0.91
Transmembrane Helix	100	121	0.90
Cytoplasmic	122	128	0.87
Transmembrane Helix	129	149	0.90
Non-Cytoplasmic	150	169	0.89
Transmembrane Helix	170	192	0.91
Cytoplasmic	193	202	0.98