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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119186481, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKDYNYDE QGQFFPFFIL TLTGLVTLPL TYTLLKPVKG LETSAPRIQS DFKPYHANLI  60
   61 EGQKQKLLRK ERRIKRIITV FAGYAIMAYM IYLIIVTQRT IPKIWDPYDI LGISRSADER 120
  121 AISRHYKRLS MKYHPDKIRP DPAKNETLEM LNDRFVELTK AYKALTDEEI RNNYLQYGHP 180
  181 DGKQSFSIGI ALPQFIVTEG NGKYVLLVYG LVLGVLLPYI VGKWWYGSQR YTKDKVLVAS 240
  241 AGNIFREYKP SLGVGGIIGA LSAGEEFNQM LANDQAHSGL ATVEQKILTE ADSGALVAGL 300
  301 SVKDRKALSE LDDERRRKVL ALLWAYLGRV DLDNPTLDTE KYEVAPIALS LNDAFTTISL 360
  361 SFGNLLPILG SLHASQHIIQ AVPPGSSPLL QLPYFTPKVI RNIEGEHSKN HMSIQRYMNL 420
  421 SEGSRRKLTI GPGLLTEKQY QTAVSVVKQI PAFEVSKAFF KVVGEKVVTP SSLVQLVVKG 480
  481 RFIPPGYTNV PEVNELELED IDSDEEDSDA VMGRKGAKPK TSKPAKQEEE EIQPPLAHAP 540
  541 YFARDHSPRW HIFLADVKAD RMAVPPFTFT TFDKPIFDEK GNPTFNMQTL KMQFQAPPQI 600
  601 GNFPFTLYVV CDSYIGFDTW RDVVLEVEGF AKAAQLAEED EISEPDEDSL AGQMQALKTG 660
  661 QAPAPRKKRP AKDESSEEDE SDTEGDVDDD TSATDTETDT DGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle