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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90304005, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISSLFPAG DASLLGLSHL LSLLSLPLAR ATLFTEVPPP PLDLGPLGRI ALTGNFDAIS  60
   61 LYTYQQQRDE VLAVYNGSQS QSLIAPLPNG GLAPISSADA DILALCPLES RDGSLEKLVV 120
  121 GGNFTSLGGI ESQGLALFDP SSGTVSAISG LSGRVLALLC DSGKVYVGGD FERSNSSNAI 180
  181 SWSRDSGFSN LPFGGFNGPV TSIVKGPHDH IIFGGSFDGL GNATTPSMKD QQMVNLETAE 240
  241 ISAGGSTIRP GFGDPRNVVC RATKQDGEGT TWLLSDQQPG YWQSQMRFGF QPTKLRLWNT 300
  301 HFEGRGTKMF RFIALPDTGI LNMTYTDPET GDQVACDARC PLSDDPAEEF RDFHFVNTVG 360
  361 MNGFRLEISE FYGQGGGLNG VELFQDDIYS YAVTDFNEPT CANIPFGSTA TKTGSWTVSP 420
  421 SVDSSADYLS AQVDSSTASS TSVTFFPDIK QSGNYSVTIF TPGCIQDGTC ATRGVVNVTG 480
  481 VFSRRDESPV QTFIHQTNNF DKYDQIHFGR VDAGSSDFRP KVTLSARTGQ GSISIVASRV 540
  541 RFQLISSTGG LNGLFDYNPD ENESNTNFSM SAINTAGNDL ERGADVNALV YKDNTLLVGG 600
  601 NFSNSTIHNI LSITDGRVAS LSGDGLNAAI SSLVSHDDLV YVGGNFTDLA GGENGKLKHV 660
  661 AAYSISDDTW IPLGSGVNGY VKSLVRFPVN ISSTRIESAI AVSGDFSQIE ESDGRKAIPA 720
  721 RGFAVWVPSE KKWLQELDVS QMAYAGQLTT SIMPGNDTIL AGTLASGGIS SHGAVALRED 780
  781 SGLALQPLPV KIQQTSDSRS RQKRALLENN GSQAVTTGLF DKASGRNLTV LAGHFSATAS 840
  841 DGSTIQNVLL IDGSDDEEVT GLGSGLNSNS TFFSAAIHRD SLFLGGKVMG RVSSTDVVGL 900
  901 VVYDLSKREF LANQPGVLEG EDVIVNSIAP RPDSNEIYVG GEFDSAGSLP CPGVCAFQAD 960
  961 ASQWVRPGSG LQGAVSVLKW VSKEKLIAAG NMTVGGNQTT LASYDAKTQI WSSIDGKSSN1020
 1021 LITGPITALG LARQDGSRFW VAGKSGGGSP FLAFFDGSEF HSAGSLFGEQ TTIKGLQVLA1080
 1081 LREDHSDSRL IENNLALLLT GQLQLPRFGI VSGAIYNGST AEPFILSSTA DGKPGSISGL1140
 1141 FTENEIELSG GRKPHSRGIV VLVSFCIALG CIFLIVLIGI ILGRIRRYRQ GYVRAPQGMD1200
 1201 RKPDLRRLPP EYLLDSLRQR APGVPTI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle